Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a4Q60857 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.29□□□□□ -0.28
Slc6a4Q60857 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Gm24548-201ENSMUST00000158650 108 ntBASIC13.29□□□□□ -0.28
Slc6a4Q60857 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.29□□□□□ -0.28
Slc6a4Q60857 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.29□□□□□ -0.28
Slc6a4Q60857 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a4Q60857 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.28□□□□□ -0.28
Slc6a4Q60857 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm15370-201ENSMUST00000117158 253 ntBASIC13.28□□□□□ -0.28
Slc6a4Q60857 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.28□□□□□ -0.28
Slc6a4Q60857 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Cts7-204ENSMUST00000225321 1257 ntBASIC13.28□□□□□ -0.28
Slc6a4Q60857 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a4Q60857 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a4Q60857 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms