Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn2bQ56A07 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.86□□□□□ -0.35
Scn2bQ56A07 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.86□□□□□ -0.35
Scn2bQ56A07 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.86□□□□□ -0.35
Scn2bQ56A07 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.86□□□□□ -0.35
Scn2bQ56A07 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn2bQ56A07 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Gm13689-201ENSMUST00000119360 685 ntBASIC12.85□□□□□ -0.35
Scn2bQ56A07 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.85□□□□□ -0.35
Scn2bQ56A07 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.85□□□□□ -0.35
Scn2bQ56A07 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.85□□□□□ -0.35
Scn2bQ56A07 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.84□□□□□ -0.35
Scn2bQ56A07 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Gm11424-201ENSMUST00000121929 829 ntBASIC12.84□□□□□ -0.35
Scn2bQ56A07 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn2bQ56A07 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms