Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm15393-201ENSMUST00000120499 219 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm25948-201ENSMUST00000175334 112 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm28630-201ENSMUST00000187806 498 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm2756-201ENSMUST00000195851 400 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm5312-201ENSMUST00000203728 547 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Daam2-202ENSMUST00000224595 1926 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Mir449b-201ENSMUST00000104833 80 ntBASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Gm27622-201ENSMUST00000183779 60 ntBASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Shd-206ENSMUST00000225145 998 ntBASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim40Q3UWA4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm15693-201ENSMUST00000120470 637 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms