Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.89□□□□□ -0.67
Znf48Q3US17 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.89□□□□□ -0.67
Znf48Q3US17 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Znf48Q3US17 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Znf48Q3US17 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Znf48Q3US17 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm15429-201ENSMUST00000151268 798 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm10275-202ENSMUST00000168697 495 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm2495-201ENSMUST00000191160 466 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm7561-201ENSMUST00000211203 886 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Znf48Q3US17 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm10275-201ENSMUST00000092620 635 ntBASIC10.88□□□□□ -0.67
Znf48Q3US17 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Znf48Q3US17 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Znf48Q3US17 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.87□□□□□ -0.67
Znf48Q3US17 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Znf48Q3US17 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Znf48Q3US17 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms