Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm28693-202ENSMUST00000190758 331 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm18187-201ENSMUST00000196476 984 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm29705-201ENSMUST00000212598 474 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.06□□□□□ -0.32
Zfp560Q3URI6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm8805-201ENSMUST00000117848 313 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm27331-201ENSMUST00000183705 60 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm37497-201ENSMUST00000195830 798 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Zfp560Q3URI6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Gm12390-201ENSMUST00000117897 397 ntBASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.04□□□□□ -0.32
Zfp560Q3URI6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 1294.1 ms