Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm12516-201ENSMUST00000120819 385 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm17877-201ENSMUST00000192578 814 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Mir8115-201ENSMUST00000184992 119 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm37299-201ENSMUST00000193951 826 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm44158-201ENSMUST00000203881 505 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gm8100-201ENSMUST00000182906 988 ntBASIC11.86□□□□□ -0.51
Spg11Q3UHA3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Spg11Q3UHA3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm15003-201ENSMUST00000118884 446 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm15744-201ENSMUST00000161734 213 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm42433-201ENSMUST00000196806 940 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm6855-201ENSMUST00000206307 790 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm22442-201ENSMUST00000157256 144 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm4868-201ENSMUST00000164138 789 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm9230-201ENSMUST00000188228 532 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm9645-201ENSMUST00000197131 792 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms