Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Brf2Q3UAW9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gm8463-201ENSMUST00000208573 613 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Brf2Q3UAW9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.24□□□□□ -0.45
Brf2Q3UAW9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms