Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Mmp11Q02853 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.65□□□□□ -0.38
Mmp11Q02853 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp11Q02853 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Mmp11Q02853 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp11Q02853 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp11Q02853 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm16479-201ENSMUST00000121706 932 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm29705-201ENSMUST00000212598 474 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Mmp11Q02853 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm10146-201ENSMUST00000072739 309 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Mmp11Q02853 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.64□□□□□ -0.39
Mmp11Q02853 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp11Q02853 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.63□□□□□ -0.39
Mmp11Q02853 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Gm8602-201ENSMUST00000184045 607 ntBASIC12.63□□□□□ -0.39
Mmp11Q02853 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.63□□□□□ -0.39
Mmp11Q02853 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp11Q02853 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp11Q02853 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms