Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.39□□□□□ -0.27
Trim43bP86448 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43bP86448 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.39□□□□□ -0.27
Trim43bP86448 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43bP86448 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.39□□□□□ -0.27
Trim43bP86448 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trim43bP86448 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Trim43bP86448 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim43bP86448 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Gm18187-201ENSMUST00000196476 984 ntBASIC13.38□□□□□ -0.27
Trim43bP86448 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim43bP86448 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim43bP86448 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim43bP86448 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.38□□□□□ -0.27
Trim43bP86448 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43bP86448 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43bP86448 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim43bP86448 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm11524-201ENSMUST00000119349 807 ntBASIC13.37□□□□□ -0.27
Trim43bP86448 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.37□□□□□ -0.27
Trim43bP86448 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim43bP86448 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Trim43bP86448 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm19078-201ENSMUST00000206311 727 ntBASIC13.37□□□□□ -0.27
Trim43bP86448 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.37□□□□□ -0.27
Trim43bP86448 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.37□□□□□ -0.27
Trim43bP86448 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms