Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.07□□□□□ -0.16
CiitaP79621 Gm13297-201ENSMUST00000120205 934 ntBASIC14.07□□□□□ -0.16
CiitaP79621 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Gm13316-201ENSMUST00000140537 691 ntBASIC14.07□□□□□ -0.16
CiitaP79621 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.07□□□□□ -0.16
CiitaP79621 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.07□□□□□ -0.16
CiitaP79621 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.07□□□□□ -0.16
CiitaP79621 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CiitaP79621 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CiitaP79621 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CiitaP79621 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CiitaP79621 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm14723-201ENSMUST00000118686 215 ntBASIC14.06□□□□□ -0.16
CiitaP79621 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.06□□□□□ -0.16
CiitaP79621 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.06□□□□□ -0.16
CiitaP79621 Mospd4-201ENSMUST00000180618 576 ntBASIC14.06□□□□□ -0.16
CiitaP79621 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.06□□□□□ -0.16
CiitaP79621 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CiitaP79621 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CiitaP79621 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.06□□□□□ -0.16
CiitaP79621 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.06□□□□□ -0.16
CiitaP79621 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CiitaP79621 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CiitaP79621 Matn2-206ENSMUST00000228570 2798 ntBASIC14.05□□□□□ -0.16
CiitaP79621 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.05□□□□□ -0.16
CiitaP79621 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CiitaP79621 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.05□□□□□ -0.16
CiitaP79621 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CiitaP79621 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.05□□□□□ -0.16
CiitaP79621 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.05□□□□□ -0.16
CiitaP79621 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.05□□□□□ -0.16
CiitaP79621 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
CiitaP79621 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms