Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Six5P70178 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.17□□□□□ -0.46
Six5P70178 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Six5P70178 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.17□□□□□ -0.46
Six5P70178 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Six5P70178 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.17□□□□□ -0.46
Six5P70178 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Gm12203-201ENSMUST00000118235 598 ntBASIC12.17□□□□□ -0.46
Six5P70178 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.17□□□□□ -0.46
Six5P70178 Gm12209-201ENSMUST00000120089 596 ntBASIC12.17□□□□□ -0.46
Six5P70178 Gm13123-201ENSMUST00000122173 492 ntBASIC12.17□□□□□ -0.46
Six5P70178 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.17□□□□□ -0.46
Six5P70178 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.17□□□□□ -0.46
Six5P70178 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Six5P70178 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.17□□□□□ -0.46
Six5P70178 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.17□□□□□ -0.46
Six5P70178 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.17□□□□□ -0.46
Six5P70178 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.17□□□□□ -0.46
Six5P70178 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.17□□□□□ -0.46
Six5P70178 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Six5P70178 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six5P70178 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.16□□□□□ -0.46
Six5P70178 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.16□□□□□ -0.46
Six5P70178 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Gm11424-201ENSMUST00000121929 829 ntBASIC12.16□□□□□ -0.46
Six5P70178 Gm2231-201ENSMUST00000125661 612 ntBASIC12.16□□□□□ -0.46
Six5P70178 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.16□□□□□ -0.46
Six5P70178 Gm24644-201ENSMUST00000157114 139 ntBASIC12.16□□□□□ -0.46
Six5P70178 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Gm27847-201ENSMUST00000183711 107 ntBASIC12.16□□□□□ -0.46
Six5P70178 Gm27375-201ENSMUST00000183799 107 ntBASIC12.16□□□□□ -0.46
Six5P70178 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Six5P70178 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.16□□□□□ -0.46
Six5P70178 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms