Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.33□□□□□ -0.12
Hmgb1P63158 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgb1P63158 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.33□□□□□ -0.12
Hmgb1P63158 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgb1P63158 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmgb1P63158 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hmgb1P63158 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgb1P63158 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgb1P63158 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.32□□□□□ -0.12
Hmgb1P63158 Gm11978-201ENSMUST00000122315 466 ntBASIC14.32□□□□□ -0.12
Hmgb1P63158 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.32□□□□□ -0.12
Hmgb1P63158 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.32□□□□□ -0.12
Hmgb1P63158 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.32□□□□□ -0.12
Hmgb1P63158 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgb1P63158 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgb1P63158 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.31□□□□□ -0.12
Hmgb1P63158 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.31□□□□□ -0.12
Hmgb1P63158 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.31□□□□□ -0.12
Hmgb1P63158 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.31□□□□□ -0.12
Hmgb1P63158 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgb1P63158 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgb1P63158 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms