Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.8□□□□□ -0.68
Lsm5P62322 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.8□□□□□ -0.68
Lsm5P62322 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Lsm5P62322 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lsm5P62322 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Gm15460-201ENSMUST00000118147 391 ntBASIC10.8□□□□□ -0.68
Lsm5P62322 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.8□□□□□ -0.68
Lsm5P62322 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.8□□□□□ -0.68
Lsm5P62322 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lsm5P62322 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lsm5P62322 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.8□□□□□ -0.68
Lsm5P62322 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm5P62322 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Lsm5P62322 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.79□□□□□ -0.68
Lsm5P62322 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Lsm5P62322 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.79□□□□□ -0.68
Lsm5P62322 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm5566-201ENSMUST00000116118 459 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm24420-201ENSMUST00000176676 59 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Gm17971-201ENSMUST00000190239 806 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm5P62322 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm5P62322 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Cog3-203ENSMUST00000227473 4197 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lsm5P62322 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.79□□□□□ -0.68
Lsm5P62322 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm5P62322 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm5P62322 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm5P62322 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm5P62322 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Gm6912-201ENSMUST00000117218 544 ntBASIC10.78□□□□□ -0.68
Lsm5P62322 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 Rprl2-201ENSMUST00000157150 290 ntBASIC10.78□□□□□ -0.68
Lsm5P62322 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.78□□□□□ -0.68
Lsm5P62322 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm5P62322 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms