Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.64□□□□□ -0.55
Abcd3P55096 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Abcd3P55096 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Abcd3P55096 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.63□□□□□ -0.55
Abcd3P55096 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abcd3P55096 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abcd3P55096 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abcd3P55096 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Abcd3P55096 Gm11618-201ENSMUST00000117946 267 ntBASIC11.63□□□□□ -0.55
Abcd3P55096 Gm14928-201ENSMUST00000120198 477 ntBASIC11.63□□□□□ -0.55
Abcd3P55096 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.63□□□□□ -0.55
Abcd3P55096 Gm28693-202ENSMUST00000190758 331 ntBASIC11.63□□□□□ -0.55
Abcd3P55096 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.63□□□□□ -0.55
Abcd3P55096 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.63□□□□□ -0.55
Abcd3P55096 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.63□□□□□ -0.55
Abcd3P55096 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abcd3P55096 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abcd3P55096 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Gm11918-201ENSMUST00000121660 179 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.62□□□□□ -0.55
Abcd3P55096 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 Gm6745-201ENSMUST00000199216 526 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Gm7287-201ENSMUST00000205267 602 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Gm9908-201ENSMUST00000211534 448 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Abcd3P55096 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.62□□□□□ -0.55
Abcd3P55096 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Abcd3P55096 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abcd3P55096 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Abcd3P55096 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Abcd3P55096 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms