Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh6P54276 Daam2-202ENSMUST00000224595 1926 ntBASIC16.36■□□□□ 0.21
Msh6P54276 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh6P54276 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Msh6P54276 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.36■□□□□ 0.21
Msh6P54276 Gm8959-201ENSMUST00000213150 571 ntBASIC16.36■□□□□ 0.21
Msh6P54276 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Gm8712-201ENSMUST00000221090 701 ntBASIC16.36■□□□□ 0.21
Msh6P54276 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Msh6P54276 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh6P54276 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh6P54276 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Msh6P54276 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.35■□□□□ 0.21
Msh6P54276 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.35■□□□□ 0.21
Msh6P54276 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Msh6P54276 Gm13492-201ENSMUST00000119772 665 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.35■□□□□ 0.21
Msh6P54276 Gm25043-201ENSMUST00000158604 212 ntBASIC16.35■□□□□ 0.21
Msh6P54276 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Msh6P54276 Gm23363-201ENSMUST00000175024 79 ntBASIC16.35■□□□□ 0.21
Msh6P54276 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Gm44262-201ENSMUST00000204969 372 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.35■□□□□ 0.21
Msh6P54276 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.35■□□□□ 0.21
Msh6P54276 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Msh6P54276 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh6P54276 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.34■□□□□ 0.21
Msh6P54276 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Msh6P54276 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Gm25700-201ENSMUST00000177693 110 ntBASIC16.34■□□□□ 0.21
Msh6P54276 Gm28450-201ENSMUST00000187349 638 ntBASIC16.34■□□□□ 0.21
Msh6P54276 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.34■□□□□ 0.21
Msh6P54276 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.34■□□□□ 0.21
Msh6P54276 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Msh6P54276 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh6P54276 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.33■□□□□ 0.21
Msh6P54276 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms