Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Gm4271-201ENSMUST00000174444 973 ntBASIC12.86□□□□□ -0.35
Pdx1P52946 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.86□□□□□ -0.35
Pdx1P52946 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.86□□□□□ -0.35
Pdx1P52946 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.86□□□□□ -0.35
Pdx1P52946 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pdx1P52946 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pdx1P52946 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdx1P52946 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pdx1P52946 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pdx1P52946 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.85□□□□□ -0.35
Pdx1P52946 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.85□□□□□ -0.35
Pdx1P52946 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pdx1P52946 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
Pdx1P52946 Gm16177-201ENSMUST00000120728 718 ntBASIC12.85□□□□□ -0.35
Pdx1P52946 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.85□□□□□ -0.35
Pdx1P52946 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pdx1P52946 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Pdx1P52946 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Pdx1P52946 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pdx1P52946 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdx1P52946 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pdx1P52946 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.84□□□□□ -0.35
Pdx1P52946 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pdx1P52946 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.84□□□□□ -0.35
Pdx1P52946 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Gm18187-201ENSMUST00000196476 984 ntBASIC12.84□□□□□ -0.35
Pdx1P52946 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.84□□□□□ -0.35
Pdx1P52946 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms