Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Brca1P48754 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Gm14644-201ENSMUST00000116671 647 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Brca1P48754 Gm18038-201ENSMUST00000197900 485 ntBASIC14.31□□□□□ -0.12
Brca1P48754 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Gm9463-201ENSMUST00000206707 601 ntBASIC14.31□□□□□ -0.12
Brca1P48754 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.31□□□□□ -0.12
Brca1P48754 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Brca1P48754 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Brca1P48754 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brca1P48754 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Brca1P48754 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.3□□□□□ -0.12
Brca1P48754 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm270-201ENSMUST00000223010 976 ntBASIC14.3□□□□□ -0.12
Brca1P48754 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Brca1P48754 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.3□□□□□ -0.12
Brca1P48754 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.3□□□□□ -0.12
Brca1P48754 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Brca1P48754 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Gm9358-201ENSMUST00000183067 927 ntBASIC14.29□□□□□ -0.12
Brca1P48754 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Ginm1-202ENSMUST00000065124 300 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Brca1P48754 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Gm25880-201ENSMUST00000104331 132 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Gm11989-201ENSMUST00000117240 672 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Gm11362-201ENSMUST00000118838 850 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.29□□□□□ -0.12
Brca1P48754 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms