Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm44855-201ENSMUST00000205725 362 ntBASIC11.76□□□□□ -0.53
Rfx3P48381 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Gm6218-201ENSMUST00000219812 628 ntBASIC11.76□□□□□ -0.53
Rfx3P48381 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.76□□□□□ -0.53
Rfx3P48381 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.76□□□□□ -0.53
Rfx3P48381 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rfx3P48381 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rfx3P48381 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfx3P48381 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rfx3P48381 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Rfx3P48381 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.75□□□□□ -0.53
Rfx3P48381 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.75□□□□□ -0.53
Rfx3P48381 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.75□□□□□ -0.53
Rfx3P48381 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.75□□□□□ -0.53
Rfx3P48381 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rfx3P48381 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.75□□□□□ -0.53
Rfx3P48381 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rfx3P48381 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Rfx3P48381 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfx3P48381 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rfx3P48381 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rfx3P48381 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Rfx3P48381 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.74□□□□□ -0.53
Rfx3P48381 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.74□□□□□ -0.53
Rfx3P48381 Gm45841-201ENSMUST00000207700 164 ntBASIC11.74□□□□□ -0.53
Rfx3P48381 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rfx3P48381 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rfx3P48381 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Rfx3P48381 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms