Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps4bP46467 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps4bP46467 Gm12091-201ENSMUST00000146791 830 ntBASIC13.21□□□□□ -0.29
Vps4bP46467 Gm18307-201ENSMUST00000206864 949 ntBASIC13.21□□□□□ -0.29
Vps4bP46467 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.21□□□□□ -0.29
Vps4bP46467 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps4bP46467 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.21□□□□□ -0.29
Vps4bP46467 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps4bP46467 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
Vps4bP46467 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps4bP46467 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.21□□□□□ -0.3
Vps4bP46467 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps4bP46467 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps4bP46467 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps4bP46467 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Vps4bP46467 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps4bP46467 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps4bP46467 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Vps4bP46467 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps4bP46467 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Mir1938-201ENSMUST00000158746 100 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Gm44397-201ENSMUST00000195950 113 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Gm18018-201ENSMUST00000198273 408 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps4bP46467 Gm6983-201ENSMUST00000214912 628 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps4bP46467 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.2□□□□□ -0.3
Vps4bP46467 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps4bP46467 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Vps4bP46467 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps4bP46467 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps4bP46467 Gm13689-201ENSMUST00000119360 685 ntBASIC13.19□□□□□ -0.3
Vps4bP46467 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.19□□□□□ -0.3
Vps4bP46467 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Vps4bP46467 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps4bP46467 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Vps4bP46467 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps4bP46467 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps4bP46467 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps4bP46467 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms