Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1P40201 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC19.03■□□□□ 0.64
Chd1P40201 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Gm24231-201ENSMUST00000104315 133 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Gm14193-201ENSMUST00000105067 153 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Gm12783-201ENSMUST00000121425 397 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chd1P40201 Gm8956-201ENSMUST00000203939 825 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Gm43912-201ENSMUST00000204352 538 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chd1P40201 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Chd1P40201 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC19.03■□□□□ 0.64
Chd1P40201 Gm42433-201ENSMUST00000196806 940 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1P40201 CT030653.1-201ENSMUST00000224382 1279 ntBASIC19.03■□□□□ 0.64
Chd1P40201 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chd1P40201 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Chd1P40201 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC19.02■□□□□ 0.64
Chd1P40201 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1P40201 Mir874-201ENSMUST00000104769 76 ntBASIC19.02■□□□□ 0.63
Chd1P40201 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC19.02■□□□□ 0.63
Chd1P40201 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC19.02■□□□□ 0.63
Chd1P40201 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Chd1P40201 Mir6407-201ENSMUST00000184510 101 ntBASIC19.02■□□□□ 0.63
Chd1P40201 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC19.02■□□□□ 0.63
Chd1P40201 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Chd1P40201 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Chd1P40201 Gm5537-201ENSMUST00000091117 1252 ntBASIC19.02■□□□□ 0.63
Chd1P40201 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Chd1P40201 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd1P40201 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Chd1P40201 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd1P40201 CT009489.1-201ENSMUST00000227740 1893 ntBASIC19.01■□□□□ 0.63
Chd1P40201 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd1P40201 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Gm13019-201ENSMUST00000120000 276 ntBASIC19.01■□□□□ 0.63
Chd1P40201 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Gm5298-201ENSMUST00000201122 892 ntBASIC19.01■□□□□ 0.63
Chd1P40201 Gm14005-208ENSMUST00000223654 681 ntBASIC19.01■□□□□ 0.63
Chd1P40201 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1P40201 Gm17213-201ENSMUST00000165161 1360 ntBASIC19.01■□□□□ 0.63
Chd1P40201 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Gm18198-201ENSMUST00000204986 1551 ntBASIC19■□□□□ 0.63
Chd1P40201 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC19■□□□□ 0.63
Chd1P40201 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19■□□□□ 0.63
Chd1P40201 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm8815-201ENSMUST00000173809 620 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm38151-201ENSMUST00000195085 289 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm9661-201ENSMUST00000221611 1122 ntBASIC19■□□□□ 0.63
Chd1P40201 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chd1P40201 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd1P40201 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC19■□□□□ 0.63
Chd1P40201 Gm5257-201ENSMUST00000121823 790 ntBASIC19■□□□□ 0.63
Chd1P40201 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Gm8723-201ENSMUST00000166076 820 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm8701-201ENSMUST00000169259 874 ntBASIC19■□□□□ 0.63
Chd1P40201 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm43752-201ENSMUST00000198475 697 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm45410-201ENSMUST00000211331 1093 ntBASIC19■□□□□ 0.63
Chd1P40201 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC19■□□□□ 0.63
Chd1P40201 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC19■□□□□ 0.63
Chd1P40201 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms