Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.19□□□□□ -0.62
Slc6a1P31648 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm27680-201ENSMUST00000184192 160 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm28630-201ENSMUST00000187806 498 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.19□□□□□ -0.62
Slc6a1P31648 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Mir497b-201ENSMUST00000093601 125 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.19□□□□□ -0.62
Slc6a1P31648 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.19□□□□□ -0.62
Slc6a1P31648 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc6a1P31648 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm13015-201ENSMUST00000118674 204 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm9719-201ENSMUST00000162765 543 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Mir6977-201ENSMUST00000184960 64 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm18766-201ENSMUST00000189811 808 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm37714-201ENSMUST00000194742 342 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.18□□□□□ -0.62
Slc6a1P31648 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc6a1P31648 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc6a1P31648 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Gm17837-201ENSMUST00000186435 985 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 Gm29541-201ENSMUST00000191351 678 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.17□□□□□ -0.62
Slc6a1P31648 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.17□□□□□ -0.62
Slc6a1P31648 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms