Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.98□□□□□ -0.49
Nedd8P29595 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nedd8P29595 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.97□□□□□ -0.49
Nedd8P29595 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.97□□□□□ -0.49
Nedd8P29595 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.97□□□□□ -0.49
Nedd8P29595 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm44124-201ENSMUST00000204159 472 ntBASIC11.97□□□□□ -0.49
Nedd8P29595 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.97□□□□□ -0.49
Nedd8P29595 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.97□□□□□ -0.49
Nedd8P29595 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.97□□□□□ -0.49
Nedd8P29595 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.97□□□□□ -0.49
Nedd8P29595 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nedd8P29595 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nedd8P29595 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.96□□□□□ -0.49
Nedd8P29595 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nedd8P29595 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.96□□□□□ -0.49
Nedd8P29595 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.96□□□□□ -0.49
Nedd8P29595 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.96□□□□□ -0.49
Nedd8P29595 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.96□□□□□ -0.49
Nedd8P29595 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.96□□□□□ -0.49
Nedd8P29595 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nedd8P29595 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nedd8P29595 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.5
Nedd8P29595 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.96□□□□□ -0.5
Nedd8P29595 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms