Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.42□□□□□ -0.58
P04224 Mir6990-201ENSMUST00000183724 91 ntBASIC11.42□□□□□ -0.58
P04224 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.42□□□□□ -0.58
P04224 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
P04224 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04224 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04224 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.42□□□□□ -0.58
P04224 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P04224 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P04224 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04224 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P04224 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Gm25911-201ENSMUST00000157621 56 ntBASIC11.41□□□□□ -0.58
P04224 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P04224 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.41□□□□□ -0.58
P04224 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
P04224 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.41□□□□□ -0.58
P04224 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.41□□□□□ -0.58
P04224 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.41□□□□□ -0.58
P04224 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P04224 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.41□□□□□ -0.58
P04224 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.41□□□□□ -0.58
P04224 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
P04224 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.41□□□□□ -0.58
P04224 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P04224 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P04224 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P04224 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.4□□□□□ -0.58
P04224 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.4□□□□□ -0.58
P04224 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P04224 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04224 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P04224 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.4□□□□□ -0.58
P04224 Gm24158-201ENSMUST00000175263 71 ntBASIC11.4□□□□□ -0.58
P04224 Gm33320-201ENSMUST00000192232 530 ntBASIC11.4□□□□□ -0.58
P04224 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.4□□□□□ -0.58
P04224 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.4□□□□□ -0.58
P04224 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P04224 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.4□□□□□ -0.58
P04224 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.4□□□□□ -0.58
P04224 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms