Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vti1aO89116 Gm13123-201ENSMUST00000122173 492 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.03□□□□□ -0.16
Vti1aO89116 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Gm7029-201ENSMUST00000173226 450 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 Gm38241-201ENSMUST00000192641 898 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vti1aO89116 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.03□□□□□ -0.16
Vti1aO89116 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vti1aO89116 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Vti1aO89116 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Vti1aO89116 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.03□□□□□ -0.16
Vti1aO89116 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.03□□□□□ -0.16
Vti1aO89116 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Grk6-205ENSMUST00000224653 2976 ntBASIC14.03□□□□□ -0.16
Vti1aO89116 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1aO89116 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Vti1aO89116 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Vti1aO89116 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.02□□□□□ -0.16
Vti1aO89116 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vti1aO89116 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vti1aO89116 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.02□□□□□ -0.17
Vti1aO89116 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vti1aO89116 Gm11793-201ENSMUST00000120433 981 ntBASIC14.02□□□□□ -0.17
Vti1aO89116 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.02□□□□□ -0.17
Vti1aO89116 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.02□□□□□ -0.17
Vti1aO89116 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.02□□□□□ -0.17
Vti1aO89116 Olfr284-202ENSMUST00000206647 966 ntBASIC14.02□□□□□ -0.17
Vti1aO89116 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.02□□□□□ -0.17
Vti1aO89116 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.02□□□□□ -0.17
Vti1aO89116 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vti1aO89116 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vti1aO89116 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vti1aO89116 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.01□□□□□ -0.17
Vti1aO89116 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vti1aO89116 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vti1aO89116 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Gm26185-201ENSMUST00000157692 266 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Gm29396-201ENSMUST00000185659 716 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.01□□□□□ -0.17
Vti1aO89116 Gm38341-201ENSMUST00000195357 515 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.01□□□□□ -0.17
Vti1aO89116 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1aO89116 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vti1aO89116 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms