Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cops4O88544 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.01□□□□□ -0.49
Cops4O88544 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.01□□□□□ -0.49
Cops4O88544 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Cops4O88544 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.01□□□□□ -0.49
Cops4O88544 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cops4O88544 Gm19931-201ENSMUST00000198920 368 ntBASIC12.01□□□□□ -0.49
Cops4O88544 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cops4O88544 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.01□□□□□ -0.49
Cops4O88544 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.01□□□□□ -0.49
Cops4O88544 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.01□□□□□ -0.49
Cops4O88544 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.01□□□□□ -0.49
Cops4O88544 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.01□□□□□ -0.49
Cops4O88544 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cops4O88544 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops4O88544 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Gm9279-201ENSMUST00000223175 1606 ntBASIC12□□□□□ -0.49
Cops4O88544 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12□□□□□ -0.49
Cops4O88544 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12□□□□□ -0.49
Cops4O88544 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Nupl1-206ENSMUST00000225111 2936 ntBASIC12□□□□□ -0.49
Cops4O88544 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm12585-201ENSMUST00000117307 290 ntBASIC12□□□□□ -0.49
Cops4O88544 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12□□□□□ -0.49
Cops4O88544 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm24420-201ENSMUST00000176676 59 ntBASIC12□□□□□ -0.49
Cops4O88544 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm27618-201ENSMUST00000183671 60 ntBASIC12□□□□□ -0.49
Cops4O88544 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Gm38294-201ENSMUST00000192831 381 ntBASIC12□□□□□ -0.49
Cops4O88544 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cops4O88544 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cops4O88544 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cops4O88544 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cops4O88544 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cops4O88544 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Gm6912-201ENSMUST00000117218 544 ntBASIC11.99□□□□□ -0.49
Cops4O88544 Gm13616-201ENSMUST00000120600 222 ntBASIC11.99□□□□□ -0.49
Cops4O88544 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.99□□□□□ -0.49
Cops4O88544 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.99□□□□□ -0.49
Cops4O88544 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.99□□□□□ -0.49
Cops4O88544 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cops4O88544 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cops4O88544 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms