Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Gm10226O88253 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.01□□□□□ -0.81
Gm10226O88253 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Gm10226O88253 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Gm10226O88253 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10226O88253 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.01□□□□□ -0.81
Gm10226O88253 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10□□□□□ -0.81
Gm10226O88253 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gm6992-201ENSMUST00000217973 1607 ntBASIC10□□□□□ -0.81
Gm10226O88253 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10□□□□□ -0.81
Gm10226O88253 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Gm10226O88253 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Mir1247-201ENSMUST00000116706 82 ntBASIC10□□□□□ -0.81
Gm10226O88253 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Gm13492-201ENSMUST00000119772 665 ntBASIC10□□□□□ -0.81
Gm10226O88253 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10□□□□□ -0.81
Gm10226O88253 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10□□□□□ -0.81
Gm10226O88253 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10□□□□□ -0.81
Gm10226O88253 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10□□□□□ -0.81
Gm10226O88253 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Gm18916-201ENSMUST00000198264 1246 ntBASIC10□□□□□ -0.81
Gm10226O88253 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10□□□□□ -0.81
Gm10226O88253 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10□□□□□ -0.81
Gm10226O88253 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Gm18222-201ENSMUST00000202416 1387 ntBASIC10□□□□□ -0.81
Gm10226O88253 Gm44401-201ENSMUST00000204462 2375 ntBASIC10□□□□□ -0.81
Gm10226O88253 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Gm10226O88253 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10226O88253 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.99□□□□□ -0.81
Gm10226O88253 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.99□□□□□ -0.81
Gm10226O88253 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Gm10226O88253 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10226O88253 Gm12502-201ENSMUST00000120197 444 ntBASIC9.99□□□□□ -0.81
Gm10226O88253 Gm13813-201ENSMUST00000120998 787 ntBASIC9.99□□□□□ -0.81
Gm10226O88253 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.99□□□□□ -0.81
Gm10226O88253 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm10226O88253 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms