Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim55G3X8Y1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm2272-201ENSMUST00000194903 582 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm44608-201ENSMUST00000206827 855 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm45167-201ENSMUST00000208007 322 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim55G3X8Y1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim55G3X8Y1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim55G3X8Y1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim55G3X8Y1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Trim55G3X8Y1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim55G3X8Y1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm9727-201ENSMUST00000161387 555 ntBASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm6736-201ENSMUST00000166583 948 ntBASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm27702-201ENSMUST00000184512 56 ntBASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.33□□□□□ -0.28
Trim55G3X8Y1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim55G3X8Y1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms