Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shank1D3YZU1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Shank1D3YZU1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12616-201ENSMUST00000118594 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12624-201ENSMUST00000177615 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm25700-201ENSMUST00000177693 110 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12621-201ENSMUST00000177760 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12615-201ENSMUST00000177970 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12622-201ENSMUST00000177975 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12627-201ENSMUST00000178412 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12625-201ENSMUST00000179122 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12614-201ENSMUST00000179586 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm12613-201ENSMUST00000180323 382 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm42997-202ENSMUST00000200321 985 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm23699-201ENSMUST00000158835 135 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Gm45770-201ENSMUST00000212105 616 ntBASIC11.64□□□□□ -0.55
Shank1D3YZU1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shank1D3YZU1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Gm24749-201ENSMUST00000157838 343 ntBASIC11.63□□□□□ -0.55
Shank1D3YZU1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.63□□□□□ -0.55
Shank1D3YZU1 Gm3508-201ENSMUST00000186012 792 ntBASIC11.63□□□□□ -0.55
Shank1D3YZU1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms