Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.31□□□□□ -0.28
Tubb1A2AQ07 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb1A2AQ07 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Proscos-202ENSMUST00000178990 666 ntBASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm28693-202ENSMUST00000190758 331 ntBASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb1A2AQ07 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm13612-201ENSMUST00000119276 390 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm14928-201ENSMUST00000120198 477 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Gm6458-201ENSMUST00000211573 635 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb1A2AQ07 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Gm23984-201ENSMUST00000157139 203 ntBASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Gm45384-201ENSMUST00000210451 277 ntBASIC13.28□□□□□ -0.28
Tubb1A2AQ07 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms