Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm13813-201ENSMUST00000120998 787 ntBASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm13342-201ENSMUST00000121055 207 ntBASIC13.56□□□□□ -0.24
Scn1aA2APX8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn1aA2APX8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Gm18041-201ENSMUST00000218210 618 ntBASIC13.55□□□□□ -0.24
Scn1aA2APX8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Gm8227-201ENSMUST00000223306 571 ntBASIC13.55□□□□□ -0.24
Scn1aA2APX8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn1aA2APX8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Cts7-204ENSMUST00000225321 1257 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm25214-201ENSMUST00000104573 129 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm43822-201ENSMUST00000200285 476 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm7783-201ENSMUST00000204795 781 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm9368-201ENSMUST00000219348 831 ntBASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn1aA2APX8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn1aA2APX8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm24526-201ENSMUST00000082921 158 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms