Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Pck2-205ENSMUST00000226352 2784 ntBASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gm15376-201ENSMUST00000122258 783 ntBASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav12d-1A0N8R0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav12d-1A0N8R0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm21854-201ENSMUST00000179901 471 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm42550-201ENSMUST00000201553 960 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Gm26315-201ENSMUST00000083890 321 ntBASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav12d-1A0N8R0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms