Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm42840-201ENSMUST00000200303 2251 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm7584-201ENSMUST00000175829 940 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Rassf8-202ENSMUST00000058538 1131 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm10608-202ENSMUST00000213924 676 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Gm9368-201ENSMUST00000219348 831 ntBASIC13□□□□□ -0.33
Scn8aQ9WTU3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn8aQ9WTU3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn8aQ9WTU3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms