Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm11618-201ENSMUST00000117946 267 ntBASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Gm45384-201ENSMUST00000210451 277 ntBASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4bQ9D8B3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Mir1894-201ENSMUST00000122802 81 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm9002-201ENSMUST00000178437 499 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm6745-201ENSMUST00000199216 526 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chmp4bQ9D8B3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gm10156-201ENSMUST00000122364 462 ntBASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp4bQ9D8B3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp4bQ9D8B3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms