Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Gm6447-201ENSMUST00000118905 835 ntBASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp5Q9D7S9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Gm13616-201ENSMUST00000120600 222 ntBASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.27■□□□□ 0.2
Chmp5Q9D7S9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp5Q9D7S9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp5Q9D7S9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp5Q9D7S9 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms