Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm25911-201ENSMUST00000157621 56 ntBASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm43125-201ENSMUST00000201724 730 ntBASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx47Q9CWX9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Mir6990-201ENSMUST00000183724 91 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx47Q9CWX9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm4995-201ENSMUST00000117247 432 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx47Q9CWX9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms