Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Khdc3Q9CWU5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Khdc3Q9CWU5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Khdc3Q9CWU5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Gm45384-201ENSMUST00000210451 277 ntBASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Khdc3Q9CWU5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.49□□□□□ -0.41
Khdc3Q9CWU5 Gm11918-201ENSMUST00000121660 179 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms