Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gm10012-201ENSMUST00000078252 192 ntBASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rpa3Q9CQ71 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm8810-201ENSMUST00000172895 754 ntBASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm24196-201ENSMUST00000179161 110 ntBASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm37922-201ENSMUST00000195596 455 ntBASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpa3Q9CQ71 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpa3Q9CQ71 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms