Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim11Q99PQ2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Gm12928-201ENSMUST00000117115 573 ntBASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim11Q99PQ2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim11Q99PQ2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Gm27701-201ENSMUST00000184498 110 ntBASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.83□□□□□ -0.04
Trim11Q99PQ2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim11Q99PQ2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Gm18018-201ENSMUST00000198273 408 ntBASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim11Q99PQ2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms