Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Cdh23Q99PF4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm16296-201ENSMUST00000159905 325 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm37299-201ENSMUST00000193951 826 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm43752-201ENSMUST00000198475 697 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm17831-201ENSMUST00000205579 900 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm25604-201ENSMUST00000158359 133 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm12196-201ENSMUST00000120954 262 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm13182-201ENSMUST00000122241 312 ntBASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh23Q99PF4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm13022-201ENSMUST00000121181 285 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh23Q99PF4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm13549-201ENSMUST00000118339 796 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm8199-201ENSMUST00000121323 823 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm18463-201ENSMUST00000207258 474 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm18460-201ENSMUST00000208088 464 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Gm40879-201ENSMUST00000220759 612 ntBASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh23Q99PF4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms