Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gm27486-201ENSMUST00000184923 80 ntBASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.7□□□□□ -0.38
Msh4Q99MT2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm13829-201ENSMUST00000119600 138 ntBASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm18473-201ENSMUST00000220543 868 ntBASIC12.69□□□□□ -0.38
Msh4Q99MT2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msh4Q99MT2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm11814-201ENSMUST00000119515 929 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm6152-201ENSMUST00000151704 340 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm6266-201ENSMUST00000203844 806 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.68□□□□□ -0.38
Msh4Q99MT2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msh4Q99MT2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms