Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC20.26■□□□□ 0.83
Clip1Q922J3 Gm2673-201ENSMUST00000120958 1608 ntBASIC20.26■□□□□ 0.83
Clip1Q922J3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm24845-201ENSMUST00000158034 109 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm45779-201ENSMUST00000212189 4064 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Gm43289-201ENSMUST00000200537 1475 ntBASIC20.25■□□□□ 0.83
Clip1Q922J3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clip1Q922J3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Clip1Q922J3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC20.24■□□□□ 0.83
Clip1Q922J3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC20.24■□□□□ 0.83
Clip1Q922J3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC20.24■□□□□ 0.83
Clip1Q922J3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Clip1Q922J3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clip1Q922J3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Gm25732-201ENSMUST00000175168 60 ntBASIC20.23■□□□□ 0.83
Clip1Q922J3 Gm25700-201ENSMUST00000177693 110 ntBASIC20.23■□□□□ 0.83
Clip1Q922J3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC20.23■□□□□ 0.83
Clip1Q922J3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Gm8798-201ENSMUST00000211877 1661 ntBASIC20.23■□□□□ 0.83
Clip1Q922J3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clip1Q922J3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clip1Q922J3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Mir5120-201ENSMUST00000175020 78 ntBASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC20.22■□□□□ 0.83
Clip1Q922J3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clip1Q922J3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms