Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhac1Q91Y10 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Pck2-205ENSMUST00000226352 2784 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm19078-201ENSMUST00000206311 727 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm24447-201ENSMUST00000083977 338 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhac1Q91Y10 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm11524-201ENSMUST00000119349 807 ntBASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm43094-201ENSMUST00000196549 921 ntBASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhac1Q91Y10 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhac1Q91Y10 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms