Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Trim60Q8VI40 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.48□□□□□ -0.25
Trim60Q8VI40 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim60Q8VI40 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.47□□□□□ -0.25
Trim60Q8VI40 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Gm22189-201ENSMUST00000103822 86 ntBASIC13.47□□□□□ -0.25
Trim60Q8VI40 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.47□□□□□ -0.25
Trim60Q8VI40 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim60Q8VI40 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.46□□□□□ -0.25
Trim60Q8VI40 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.46□□□□□ -0.25
Trim60Q8VI40 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.46□□□□□ -0.25
Trim60Q8VI40 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.46□□□□□ -0.25
Trim60Q8VI40 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms