Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.15□□□□□ -0.31
Rpa1Q8VEE4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rpa1Q8VEE4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rpa1Q8VEE4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm23935-201ENSMUST00000102303 57 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm24270-201ENSMUST00000102326 57 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm15653-201ENSMUST00000119247 907 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm24245-201ENSMUST00000157318 57 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm25948-201ENSMUST00000175334 112 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gm9229-201ENSMUST00000222777 126 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Shd-206ENSMUST00000225145 998 ntBASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpa1Q8VEE4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm43474-201ENSMUST00000196415 774 ntBASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rpa1Q8VEE4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpa1Q8VEE4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms