Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm9719-201ENSMUST00000162765 543 ntBASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm25948-201ENSMUST00000175334 112 ntBASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam20bQ8VCS3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm18766-201ENSMUST00000189811 808 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam20bQ8VCS3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam20bQ8VCS3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms