Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Gm18041-201ENSMUST00000218210 618 ntBASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Cdt1Q8R4E9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm16570-201ENSMUST00000161951 436 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm27516-201ENSMUST00000184237 98 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdt1Q8R4E9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Cdt1Q8R4E9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdt1Q8R4E9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdt1Q8R4E9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdt1Q8R4E9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdt1Q8R4E9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms