Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Gm28630-201ENSMUST00000187806 498 ntBASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc58Q8R3Q6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc58Q8R3Q6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm25911-201ENSMUST00000157621 56 ntBASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm10253-201ENSMUST00000194270 940 ntBASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm43474-201ENSMUST00000196415 774 ntBASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Shd-206ENSMUST00000225145 998 ntBASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Ccdc58Q8R3Q6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Gm15693-201ENSMUST00000120470 637 ntBASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc58Q8R3Q6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms