Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Gm11930-201ENSMUST00000117788 190 ntBASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Gm15547-201ENSMUST00000122152 333 ntBASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Gm16505-201ENSMUST00000179981 232 ntBASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp7Q8R1T1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm45186-201ENSMUST00000206874 478 ntBASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp7Q8R1T1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chmp7Q8R1T1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chmp7Q8R1T1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp7Q8R1T1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp7Q8R1T1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp7Q8R1T1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gm12058-201ENSMUST00000118614 437 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gm12291-201ENSMUST00000121627 311 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gm24990-201ENSMUST00000157406 323 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gm27046-201ENSMUST00000182160 463 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gm45925-201ENSMUST00000218882 744 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp7Q8R1T1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms