Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.7□□□□□ -0.38
Rab43Q8CG50 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.7□□□□□ -0.38
Rab43Q8CG50 Gm5904-201ENSMUST00000210286 865 ntBASIC12.7□□□□□ -0.38
Rab43Q8CG50 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rab43Q8CG50 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab43Q8CG50 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm13316-201ENSMUST00000140537 691 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm22121-201ENSMUST00000175148 54 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm30285-201ENSMUST00000214614 422 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab43Q8CG50 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rab43Q8CG50 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms