Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc87Q8CDL9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc87Q8CDL9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gm37917-201ENSMUST00000194711 392 ntBASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc87Q8CDL9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc87Q8CDL9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc87Q8CDL9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms